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Peptide record

TPDB05968

Antibacterial standard
10 amino acids
Basic Information
3D PDB MODEL
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TPDB05968
Antibacterial
Anti-infective peptides
AntiBP3 Peptipedia
standard
No
A 10-aa standard-residue antibacterial peptide sequence curated from AntiBP3 and Peptipedia, with an available 3D structural model.
Sequence
ALHCIALRKK
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C51H93N17O11S1
NDEQGMFPSTWYV
ALK
1152.47
10.59
4
0
5
+3
1.10
0.270
137.00
Mammalian: 4.4 hour Yeast: >20 hour E.coli: >10 hour
0
0.00
1
Residue Composition
number
2
A
1
R
0
N
0
D
1
C
0
E
0
Q
0
G
1
H
1
I
2
L
2
K
0
M
0
F
0
P
0
S
0
T
0
W
0
Y
0
V
Amino Acid Distribution
A: 2 R: 1 N: 0 D: 0 C: 1 E: 0 Q: 0 G: 0 H: 1 I: 1 L: 2 K: 2 M: 0 F: 0 P: 0 S: 0 T: 0 W: 0 Y: 0 V: 0
Chemical Descriptors
10 reviewed residue count
C51H93N17O11S1 sequence-only estimate (linear, free termini)
1152.47 sequence-only estimate (linear, free termini)
10.59 sequence-only estimate (linear, free termini)
+3 sequence-only estimate (linear, free termini)
1.10 sequence-only estimate (linear, free termini)
0.270 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA