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Peptide record

TPDB05948

Antibacterial standard
10 amino acids
Basic Information
3D PDB MODEL
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TPDB05948
Antibacterial
Anti-infective peptides
AntiBP3 Peptipedia
standard
No
A 10-aa standard-residue antibacterial peptide sequence curated from AntiBP3 and Peptipedia, with an available 3D structural model.
Sequence
WHWRIRKKLR
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C70H111N25O11
ANDCEQGMFPSTYV
R
1478.81
12.71
6
0
4
+5
4.60
-1.800
78.00
Mammalian: 2.8 hour Yeast: 3 min E.coli: 2 min
11000
7.44
0
Residue Composition
number
0
A
3
R
0
N
0
D
0
C
0
E
0
Q
0
G
1
H
1
I
1
L
2
K
0
M
0
F
0
P
0
S
0
T
2
W
0
Y
0
V
Amino Acid Distribution
A: 0 R: 3 N: 0 D: 0 C: 0 E: 0 Q: 0 G: 0 H: 1 I: 1 L: 1 K: 2 M: 0 F: 0 P: 0 S: 0 T: 0 W: 2 Y: 0 V: 0
Chemical Descriptors
10 reviewed residue count
C70H111N25O11 sequence-only estimate (linear, free termini)
1478.81 sequence-only estimate (linear, free termini)
12.71 sequence-only estimate (linear, free termini)
+5 sequence-only estimate (linear, free termini)
4.60 sequence-only estimate (linear, free termini)
-1.800 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA