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Peptide record

TPDB05910

Antibacterial standard
9 amino acids
Basic Information
3D PDB MODEL
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TPDB05910
Antibacterial
Anti-infective peptides
AntiBP3
standard
No
A 9-aa standard-residue antibacterial peptide sequence curated from AntiBP3, with an available 3D structural model.
Sequence
RRRSVQWCA
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C48H80N20O12S1
NDEGHILKMFPTY
R
1161.35
12.10
3
0
3
+3
4.92
-1.133
43.33
Mammalian: 1 hour Yeast: 2 min E.coli: 2 min
5500
4.74
3
Residue Composition
number
1
A
3
R
0
N
0
D
1
C
0
E
1
Q
0
G
0
H
0
I
0
L
0
K
0
M
0
F
0
P
1
S
0
T
1
W
0
Y
1
V
Amino Acid Distribution
A: 1 R: 3 N: 0 D: 0 C: 1 E: 0 Q: 1 G: 0 H: 0 I: 0 L: 0 K: 0 M: 0 F: 0 P: 0 S: 1 T: 0 W: 1 Y: 0 V: 1
Chemical Descriptors
9 reviewed residue count
C48H80N20O12S1 sequence-only estimate (linear, free termini)
1161.35 sequence-only estimate (linear, free termini)
12.10 sequence-only estimate (linear, free termini)
+3 sequence-only estimate (linear, free termini)
4.92 sequence-only estimate (linear, free termini)
-1.133 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA