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Peptide record

TPDB05878

Antibacterial Toxicity standard
9 amino acids
Basic Information
3D PDB MODEL
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TPDB05878
Antibacterial Toxicity
Anti-infective peptides Toxicity and safety peptides
AntiBP3 Peptipedia
standard
No
A 9-aa standard-residue multi-activity (Antibacterial and Toxicity) peptide sequence curated from AntiBP3 and Peptipedia, with an available 3D structural model.
Sequence
STVLTSKYR
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C46H79N13O15
ANDCEQGHIMFPW
ST
1054.21
10.42
2
0
3
+2
2.62
-0.522
75.56
Mammalian: 1.9 hour Yeast: >20 hour E.coli: >10 hour
1490
1.41
5
Residue Composition
number
0
A
1
R
0
N
0
D
0
C
0
E
0
Q
0
G
0
H
0
I
1
L
1
K
0
M
0
F
0
P
2
S
2
T
0
W
1
Y
1
V
Amino Acid Distribution
A: 0 R: 1 N: 0 D: 0 C: 0 E: 0 Q: 0 G: 0 H: 0 I: 0 L: 1 K: 1 M: 0 F: 0 P: 0 S: 2 T: 2 W: 0 Y: 1 V: 1
Chemical Descriptors
9 reviewed residue count
C46H79N13O15 sequence-only estimate (linear, free termini)
1054.21 sequence-only estimate (linear, free termini)
10.42 sequence-only estimate (linear, free termini)
+2 sequence-only estimate (linear, free termini)
2.62 sequence-only estimate (linear, free termini)
-0.522 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Activity

Toxicity
Hemolytic Cytotoxic
- | NA | target cell: Bovine erythrocytes

Target

Bovine erythrocytes

Source & Reference

NA
DBAASP
Isolation and characterization of four antibacterial peptides from bovine hemoglobin. | Peptides | 2006