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Peptide record

TPDB05857

Antibacterial standard
9 amino acids
Basic Information
3D PDB MODEL
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TPDB05857
Antibacterial
Anti-infective peptides
AntiBP3 pep-lab Peptipedia
standard
No
A 9-aa standard-residue antibacterial peptide sequence curated from AntiBP3, pep-lab, and Peptipedia, with an available 3D structural model.
Sequence
IKHQGLPQE
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C46H76N14O14
ARNDCMFSTWYV
Q
1049.19
7.82
2
1
2
+0
1.92
-1.256
86.67
Mammalian: 20 hour Yeast: 30 min E.coli: >10 hour
0
0.00
2
Residue Composition
number
0
A
0
R
0
N
0
D
0
C
1
E
2
Q
1
G
1
H
1
I
1
L
1
K
0
M
0
F
1
P
0
S
0
T
0
W
0
Y
0
V
Amino Acid Distribution
A: 0 R: 0 N: 0 D: 0 C: 0 E: 1 Q: 2 G: 1 H: 1 I: 1 L: 1 K: 1 M: 0 F: 0 P: 1 S: 0 T: 0 W: 0 Y: 0 V: 0
Chemical Descriptors
9 reviewed residue count
C46H76N14O14 sequence-only estimate (linear, free termini)
1049.19 sequence-only estimate (linear, free termini)
7.82 sequence-only estimate (linear, free termini)
+0 sequence-only estimate (linear, free termini)
1.92 sequence-only estimate (linear, free termini)
-1.256 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA