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Peptide record

TPDB05819

Antibacterial standard
9 amino acids
Basic Information
3D PDB MODEL
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TPDB05819
Antibacterial
Anti-infective peptides
AntiBP3 Peptipedia
standard
No
A 9-aa standard-residue antibacterial peptide sequence curated from AntiBP3 and Peptipedia, with an available 3D structural model.
Sequence
ARWWWKIKS
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C63H89N17O11
NDCEQGHLMFPTYV
W
1260.51
11.64
3
0
5
+3
1.74
-1.056
54.44
Mammalian: 4.4 hour Yeast: >20 hour E.coli: >10 hour
16500
13.09
1
Residue Composition
number
1
A
1
R
0
N
0
D
0
C
0
E
0
Q
0
G
0
H
1
I
0
L
2
K
0
M
0
F
0
P
1
S
0
T
3
W
0
Y
0
V
Amino Acid Distribution
A: 1 R: 1 N: 0 D: 0 C: 0 E: 0 Q: 0 G: 0 H: 0 I: 1 L: 0 K: 2 M: 0 F: 0 P: 0 S: 1 T: 0 W: 3 Y: 0 V: 0
Chemical Descriptors
9 reviewed residue count
C63H89N17O11 sequence-only estimate (linear, free termini)
1260.51 sequence-only estimate (linear, free termini)
11.64 sequence-only estimate (linear, free termini)
+3 sequence-only estimate (linear, free termini)
1.74 sequence-only estimate (linear, free termini)
-1.056 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA