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Peptide record

TPDB05806

Antibacterial standard
9 amino acids
Basic Information
3D PDB MODEL
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TPDB05806
Antibacterial
Anti-infective peptides
AntiBP3 Peptipedia
standard
No
A 9-aa standard-residue antibacterial peptide sequence curated from AntiBP3 and Peptipedia, with an available 3D structural model.
Sequence
VVLKIVRRF
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C54H96N16O10
ANDCEQGHMPSTWY
V
1129.46
12.41
3
0
6
+3
1.16
1.200
183.33
Mammalian: 100 hour Yeast: >20 hour E.coli: >10 hour
0
0.00
0
Residue Composition
number
0
A
2
R
0
N
0
D
0
C
0
E
0
Q
0
G
0
H
1
I
1
L
1
K
0
M
1
F
0
P
0
S
0
T
0
W
0
Y
3
V
Amino Acid Distribution
A: 0 R: 2 N: 0 D: 0 C: 0 E: 0 Q: 0 G: 0 H: 0 I: 1 L: 1 K: 1 M: 0 F: 1 P: 0 S: 0 T: 0 W: 0 Y: 0 V: 3
Chemical Descriptors
9 reviewed residue count
C54H96N16O10 sequence-only estimate (linear, free termini)
1129.46 sequence-only estimate (linear, free termini)
12.41 sequence-only estimate (linear, free termini)
+3 sequence-only estimate (linear, free termini)
1.16 sequence-only estimate (linear, free termini)
1.200 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA