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Peptide record

TPDB05795

Antibacterial standard
9 amino acids
Basic Information
3D PDB MODEL
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TPDB05795
Antibacterial
Anti-infective peptides
AntiBP3 Peptipedia
standard
No
A 9-aa standard-residue antibacterial peptide sequence curated from AntiBP3 and Peptipedia, with an available 3D structural model.
Sequence
IKAQGLPQE
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C43H74N12O14
RNDCHMFSTWYV
Q
983.13
6.94
1
1
3
-0
1.21
-0.700
97.78
Mammalian: 20 hour Yeast: 30 min E.coli: >10 hour
0
0.00
2
Residue Composition
number
1
A
0
R
0
N
0
D
0
C
1
E
2
Q
1
G
0
H
1
I
1
L
1
K
0
M
0
F
1
P
0
S
0
T
0
W
0
Y
0
V
Amino Acid Distribution
A: 1 R: 0 N: 0 D: 0 C: 0 E: 1 Q: 2 G: 1 H: 0 I: 1 L: 1 K: 1 M: 0 F: 0 P: 1 S: 0 T: 0 W: 0 Y: 0 V: 0
Chemical Descriptors
9 reviewed residue count
C43H74N12O14 sequence-only estimate (linear, free termini)
983.13 sequence-only estimate (linear, free termini)
6.94 sequence-only estimate (linear, free termini)
-0 sequence-only estimate (linear, free termini)
1.21 sequence-only estimate (linear, free termini)
-0.700 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA