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Peptide record

TPDB05744

Antibacterial standard
9 amino acids
Basic Information
3D PDB MODEL
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TPDB05744
Antibacterial
Anti-infective peptides
AntiBP3 Peptipedia
standard
No
A 9-aa standard-residue antibacterial peptide sequence curated from AntiBP3 and Peptipedia, with an available 3D structural model.
Sequence
WWQDWWNEW
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C73H78N16O16
ARCGHILKMFPSTYV
W
1435.52
3.01
0
2
5
-2
1.78
-2.056
0.00
Mammalian: 2.8 hour Yeast: 3 min E.coli: 2 min
27500
19.16
2
Residue Composition
number
0
A
0
R
1
N
1
D
0
C
1
E
1
Q
0
G
0
H
0
I
0
L
0
K
0
M
0
F
0
P
0
S
0
T
5
W
0
Y
0
V
Amino Acid Distribution
A: 0 R: 0 N: 1 D: 1 C: 0 E: 1 Q: 1 G: 0 H: 0 I: 0 L: 0 K: 0 M: 0 F: 0 P: 0 S: 0 T: 0 W: 5 Y: 0 V: 0
Chemical Descriptors
9 reviewed residue count
C73H78N16O16 sequence-only estimate (linear, free termini)
1435.52 sequence-only estimate (linear, free termini)
3.01 sequence-only estimate (linear, free termini)
-2 sequence-only estimate (linear, free termini)
1.78 sequence-only estimate (linear, free termini)
-2.056 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA