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Peptide record

TPDB05742

Antibacterial standard
9 amino acids
Basic Information
3D PDB MODEL
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TPDB05742
Antibacterial
Anti-infective peptides
AntiBP3 Peptipedia
standard
No
A 9-aa standard-residue antibacterial peptide sequence curated from AntiBP3 and Peptipedia, with an available 3D structural model.
Sequence
WWHSWWSTW
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C71H76N16O13
ARNDCEQGILKMFPYV
W
1361.48
7.85
1
0
5
+0
0.26
-1.111
0.00
Mammalian: 2.8 hour Yeast: 3 min E.coli: 2 min
27500
20.20
3
Residue Composition
number
0
A
0
R
0
N
0
D
0
C
0
E
0
Q
0
G
1
H
0
I
0
L
0
K
0
M
0
F
0
P
2
S
1
T
5
W
0
Y
0
V
Amino Acid Distribution
A: 0 R: 0 N: 0 D: 0 C: 0 E: 0 Q: 0 G: 0 H: 1 I: 0 L: 0 K: 0 M: 0 F: 0 P: 0 S: 2 T: 1 W: 5 Y: 0 V: 0
Chemical Descriptors
9 reviewed residue count
C71H76N16O13 sequence-only estimate (linear, free termini)
1361.48 sequence-only estimate (linear, free termini)
7.85 sequence-only estimate (linear, free termini)
+0 sequence-only estimate (linear, free termini)
0.26 sequence-only estimate (linear, free termini)
-1.111 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA