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Peptide record

TPDB05723

Antibacterial standard
9 amino acids
Basic Information
3D PDB MODEL
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TPDB05723
Antibacterial
Anti-infective peptides
AntiBP3 Peptipedia
standard
No
A 9-aa standard-residue antibacterial peptide sequence curated from AntiBP3 and Peptipedia, with an available 3D structural model.
Sequence
RRWVAWRNR
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C58H90N24O11
DCEQGHILKMFPSTY
R
1299.51
12.88
4
0
4
+4
6.20
-1.922
43.33
Mammalian: 1 hour Yeast: 2 min E.coli: 2 min
11000
8.46
1
Residue Composition
number
1
A
4
R
1
N
0
D
0
C
0
E
0
Q
0
G
0
H
0
I
0
L
0
K
0
M
0
F
0
P
0
S
0
T
2
W
0
Y
1
V
Amino Acid Distribution
A: 1 R: 4 N: 1 D: 0 C: 0 E: 0 Q: 0 G: 0 H: 0 I: 0 L: 0 K: 0 M: 0 F: 0 P: 0 S: 0 T: 0 W: 2 Y: 0 V: 1
Chemical Descriptors
9 reviewed residue count
C58H90N24O11 sequence-only estimate (linear, free termini)
1299.51 sequence-only estimate (linear, free termini)
12.88 sequence-only estimate (linear, free termini)
+4 sequence-only estimate (linear, free termini)
6.20 sequence-only estimate (linear, free termini)
-1.922 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA