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Peptide record

TPDB05687

Antibacterial standard
9 amino acids
Basic Information
3D PDB MODEL
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TPDB05687
Antibacterial
Anti-infective peptides
AntiBP3 Peptipedia
standard
No
A 9-aa standard-residue antibacterial peptide sequence curated from AntiBP3 and Peptipedia, with an available 3D structural model.
Sequence
KRFRIRVRV
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C55H100N22O10
ANDCEQGHLMPSTWY
R
1229.54
12.88
5
0
4
+5
5.47
-0.689
107.78
Mammalian: 1.3 hour Yeast: 3 min E.coli: 2 min
0
0.00
0
Residue Composition
number
0
A
4
R
0
N
0
D
0
C
0
E
0
Q
0
G
0
H
1
I
0
L
1
K
0
M
1
F
0
P
0
S
0
T
0
W
0
Y
2
V
Amino Acid Distribution
A: 0 R: 4 N: 0 D: 0 C: 0 E: 0 Q: 0 G: 0 H: 0 I: 1 L: 0 K: 1 M: 0 F: 1 P: 0 S: 0 T: 0 W: 0 Y: 0 V: 2
Chemical Descriptors
9 reviewed residue count
C55H100N22O10 sequence-only estimate (linear, free termini)
1229.54 sequence-only estimate (linear, free termini)
12.88 sequence-only estimate (linear, free termini)
+5 sequence-only estimate (linear, free termini)
5.47 sequence-only estimate (linear, free termini)
-0.689 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA