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Peptide record

TPDB05653

Antibacterial standard
8 amino acids
Basic Information
3D PDB MODEL
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TPDB05653
Antibacterial
Anti-infective peptides
AntiBP3 Peptipedia
standard
No
A 8-aa standard-residue antibacterial peptide sequence curated from AntiBP3 and Peptipedia, with an available 3D structural model.
Sequence
EEEEWWWW
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C64H70N12O17
ARNDCQGHILKMFPSTYV
EW
1279.33
2.96
0
4
4
-4
2.24
-2.200
0.00
Mammalian: 1 hour Yeast: 30 min E.coli: >10 hour
22000
17.20
0
Residue Composition
number
0
A
0
R
0
N
0
D
0
C
4
E
0
Q
0
G
0
H
0
I
0
L
0
K
0
M
0
F
0
P
0
S
0
T
4
W
0
Y
0
V
Amino Acid Distribution
A: 0 R: 0 N: 0 D: 0 C: 0 E: 4 Q: 0 G: 0 H: 0 I: 0 L: 0 K: 0 M: 0 F: 0 P: 0 S: 0 T: 0 W: 4 Y: 0 V: 0
Chemical Descriptors
8 reviewed residue count
C64H70N12O17 sequence-only estimate (linear, free termini)
1279.33 sequence-only estimate (linear, free termini)
2.96 sequence-only estimate (linear, free termini)
-4 sequence-only estimate (linear, free termini)
2.24 sequence-only estimate (linear, free termini)
-2.200 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA