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Peptide record

TPDB05585

Antibacterial standard
8 amino acids
Basic Information
3D PDB MODEL
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TPDB05585
Antibacterial
Anti-infective peptides
AntiBP3 Peptipedia
standard
No
A 8-aa standard-residue antibacterial peptide sequence curated from AntiBP3 and Peptipedia, with an available 3D structural model.
Sequence
YPELFRQF
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C54H74N12O13
ANDCGHIKMSTWV
F
1099.25
6.90
1
1
4
-0
2.07
-0.625
48.75
Mammalian: 2.8 hour Yeast: 10 min E.coli: 2 min
1490
1.36
2
Residue Composition
number
0
A
1
R
0
N
0
D
0
C
1
E
1
Q
0
G
0
H
0
I
1
L
0
K
0
M
2
F
1
P
0
S
0
T
0
W
1
Y
0
V
Amino Acid Distribution
A: 0 R: 1 N: 0 D: 0 C: 0 E: 1 Q: 1 G: 0 H: 0 I: 0 L: 1 K: 0 M: 0 F: 2 P: 1 S: 0 T: 0 W: 0 Y: 1 V: 0
Chemical Descriptors
8 reviewed residue count
C54H74N12O13 sequence-only estimate (linear, free termini)
1099.25 sequence-only estimate (linear, free termini)
6.90 sequence-only estimate (linear, free termini)
-0 sequence-only estimate (linear, free termini)
2.07 sequence-only estimate (linear, free termini)
-0.625 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA