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Peptide record

TPDB05530

Antibacterial standard
8 amino acids
Basic Information
3D PDB MODEL
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TPDB05530
Antibacterial
Anti-infective peptides
AntiBP3 Peptipedia
standard
No
A 8-aa standard-residue antibacterial peptide sequence curated from AntiBP3 and Peptipedia, with an available 3D structural model.
Sequence
VLNENLRR
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C42H76N16O13
ADCQGHIKMFPSTWY
RNL
1013.16
10.89
2
1
3
+1
4.51
-0.963
133.75
Mammalian: 100 hour Yeast: >20 hour E.coli: >10 hour
0
0.00
2
Residue Composition
number
0
A
2
R
2
N
0
D
0
C
1
E
0
Q
0
G
0
H
0
I
2
L
0
K
0
M
0
F
0
P
0
S
0
T
0
W
0
Y
1
V
Amino Acid Distribution
A: 0 R: 2 N: 2 D: 0 C: 0 E: 1 Q: 0 G: 0 H: 0 I: 0 L: 2 K: 0 M: 0 F: 0 P: 0 S: 0 T: 0 W: 0 Y: 0 V: 1
Chemical Descriptors
8 reviewed residue count
C42H76N16O13 sequence-only estimate (linear, free termini)
1013.16 sequence-only estimate (linear, free termini)
10.89 sequence-only estimate (linear, free termini)
+1 sequence-only estimate (linear, free termini)
4.51 sequence-only estimate (linear, free termini)
-0.963 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA