TPDB

3D PDB MODEL

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TPDB ID TPDB05380

Activity

Antibacterial Antiviral

Activity_category_statistics

Anti-infective peptides

Database_Source

AntiBP3 Peptipedia AI4AVP dbAMP 3.0 DRAVP 2.0

Sequence_Type

standard

Has_Modification No

Description A 11-aa standard natural multi-activity (Antibacterial and Antiviral) peptide sequence curated from AntiBP3, Peptipedia, AI4AVP, and other sources, with an available 3D structural model.

Sequence

ACWWAGIKQEF

FASTA

>TPDB05380|Antibacterial;Antiviral|length=11
ACWWAGIKQEF

Formula C64H87N15O15S1

Absent Amino Acids RNDHLMPSTYV

Common Amino Acids AW

Mass 1338.55

PI 6.28

Basic Residues 1

Acidic Residues 1

Hydrophobic Residues 6

Net Charge -0

Boman Index -2.12

Hydrophobicity 0.027

Aliphatic Index 53.64

Half Life

Mammalian: 4.4 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 11000

Absorbance 280nm 821.79

Polar Residues 2

number

2

A

0

R

0

N

0

D

1

C

1

E

1

Q

1

G

0

H

1

I

0

L

1

K

0

M

1

F

0

P

0

S

0

T

2

W

0

Y

0

V

Amino Acid Distribution

A: 2 R: 0 N: 0 D: 0 C: 1 E: 1 Q: 1 G: 1 H: 0 I: 1 L: 0 K: 1 M: 0 F: 1 P: 0 S: 0 T: 0 W: 2 Y: 0 V: 0

Length

11

Formula

C64H87N15O15S1

Mass

1338.55

PI

6.28

Net Charge

-0

Boman Index

-2.12

Hydrophobicity

0.027

Evidence 1 Activity

Source & Reference

Database Source dbAMP 3.0 DRAVP 2.0