TPDB

3D PDB MODEL

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TPDB ID TPDB05371

Activity

Antibacterial Antiviral

Activity_category_statistics

Anti-infective peptides

Database_Source

AntiBP3 Peptipedia AI4AVP dbAMP 3.0 DRAVP 2.0

Sequence_Type

standard

Has_Modification No

Description A 12-aa standard natural multi-activity (Antibacterial and Antiviral) peptide sequence curated from AntiBP3, Peptipedia, AI4AVP, and other sources, with an available 3D structural model.

Sequence

VSFAIKWEYVLL

FASTA

>TPDB05371|Antibacterial;Antiviral|length=12
VSFAIKWEYVLL

Formula C74H110N14O17

Absent Amino Acids RNDCQGHMPT

Common Amino Acids LV

Mass 1467.77

PI 6.87

Basic Residues 1

Acidic Residues 1

Hydrophobic Residues 9

Net Charge -0

Boman Index -2.24

Hydrophobicity 1.225

Aliphatic Index 154.17

Half Life

Mammalian: 100 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 6990

Absorbance 280nm 476.23

Polar Residues 2

number

1

A

0

R

0

N

0

D

0

C

1

E

0

Q

0

G

0

H

1

I

2

L

1

K

0

M

1

F

0

P

1

S

0

T

1

W

1

Y

2

V

Amino Acid Distribution

A: 1 R: 0 N: 0 D: 0 C: 0 E: 1 Q: 0 G: 0 H: 0 I: 1 L: 2 K: 1 M: 0 F: 1 P: 0 S: 1 T: 0 W: 1 Y: 1 V: 2

Length

12

Formula

C74H110N14O17

Mass

1467.77

PI

6.87

Net Charge

-0

Boman Index

-2.24

Hydrophobicity

1.225

Evidence 1 Activity

Source & Reference

Database Source dbAMP 3.0 DRAVP 2.0