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Peptide record

TPDB05176

Antibacterial standard
18 amino acids
Basic Information
3D PDB MODEL
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TPDB05176
Antibacterial
Anti-infective peptides
AntiBP3 Peptipedia
standard
No
A 18-aa standard-residue antibacterial peptide sequence curated from AntiBP3 and Peptipedia, with an available 3D structural model.
Sequence
YLKGCWTKSYPPKPCFSR
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C101H149N25O24S2
ANDEQHIMV
KP
2161.57
9.91
4
0
5
+4
1.53
-0.867
21.67
Mammalian: 2.8 hour Yeast: 10 min E.coli: 2 min
8605
3.98
7
Residue Composition
number
0
A
1
R
0
N
0
D
2
C
0
E
0
Q
1
G
0
H
0
I
1
L
3
K
0
M
1
F
3
P
2
S
1
T
1
W
2
Y
0
V
Amino Acid Distribution
A: 0 R: 1 N: 0 D: 0 C: 2 E: 0 Q: 0 G: 1 H: 0 I: 0 L: 1 K: 3 M: 0 F: 1 P: 3 S: 2 T: 1 W: 1 Y: 2 V: 0
Chemical Descriptors
18 reviewed residue count
C101H149N25O24S2 sequence-only estimate (linear, free termini)
2161.57 sequence-only estimate (linear, free termini)
9.91 sequence-only estimate (linear, free termini)
+4 sequence-only estimate (linear, free termini)
1.53 sequence-only estimate (linear, free termini)
-0.867 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA