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Peptide record

TPDB05003

Antibacterial standard
15 amino acids
Basic Information
3D PDB MODEL
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TPDB05003
Antibacterial
Anti-infective peptides
AntiBP3 Peptipedia
standard
No
A 15-aa standard-residue antibacterial peptide sequence curated from AntiBP3 and Peptipedia, with an available 3D structural model.
Sequence
GLLDVVGNLLGGLGL
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C64H112N16O19
ARCEQHIKMFPSTWY
L
1409.69
3.10
0
1
8
-1
-1.80
1.480
194.67
Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour
0
0.00
1
Residue Composition
number
0
A
0
R
1
N
1
D
0
C
0
E
0
Q
5
G
0
H
0
I
6
L
0
K
0
M
0
F
0
P
0
S
0
T
0
W
0
Y
2
V
Amino Acid Distribution
A: 0 R: 0 N: 1 D: 1 C: 0 E: 0 Q: 0 G: 5 H: 0 I: 0 L: 6 K: 0 M: 0 F: 0 P: 0 S: 0 T: 0 W: 0 Y: 0 V: 2
Chemical Descriptors
15 reviewed residue count
C64H112N16O19 sequence-only estimate (linear, free termini)
1409.69 sequence-only estimate (linear, free termini)
3.10 sequence-only estimate (linear, free termini)
-1 sequence-only estimate (linear, free termini)
-1.80 sequence-only estimate (linear, free termini)
1.480 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA