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Peptide record

TPDB04790

Antibacterial standard
19 amino acids
Basic Information
3D PDB MODEL
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TPDB04790
Antibacterial
Anti-infective peptides
AntiBP3 Peptipedia
standard
No
A 19-aa standard-residue antibacterial peptide sequence curated from AntiBP3 and Peptipedia, with an available 3D structural model.
Sequence
RWRWRWFPSGSPRWRWRWF
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C138H179N43O22
ANDCEQHILKMTYV
RW
2792.21
13.10
6
0
8
+6
3.97
-1.684
0.00
Mammalian: 1 hour Yeast: 2 min E.coli: 2 min
33000
11.82
2
Residue Composition
number
0
A
6
R
0
N
0
D
0
C
0
E
0
Q
1
G
0
H
0
I
0
L
0
K
0
M
2
F
2
P
2
S
0
T
6
W
0
Y
0
V
Amino Acid Distribution
A: 0 R: 6 N: 0 D: 0 C: 0 E: 0 Q: 0 G: 1 H: 0 I: 0 L: 0 K: 0 M: 0 F: 2 P: 2 S: 2 T: 0 W: 6 Y: 0 V: 0
Chemical Descriptors
19 reviewed residue count
C138H179N43O22 sequence-only estimate (linear, free termini)
2792.21 sequence-only estimate (linear, free termini)
13.10 sequence-only estimate (linear, free termini)
+6 sequence-only estimate (linear, free termini)
3.97 sequence-only estimate (linear, free termini)
-1.684 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA