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Peptide record

TPDB04785

Antibacterial standard
18 amino acids
Basic Information
3D PDB MODEL
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TPDB04785
Antibacterial
Anti-infective peptides
AntiBP3 Peptipedia
standard
No
A 18-aa standard-residue antibacterial peptide sequence curated from AntiBP3 and Peptipedia, with an available 3D structural model.
Sequence
ARNVSEENVDRLAKRWIK
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C94H158N32O28
CQGHMFPTY
R
2184.49
10.56
5
3
7
+2
3.94
-1.122
86.67
Mammalian: 4.4 hour Yeast: >20 hour E.coli: >10 hour
5500
2.52
3
Residue Composition
number
2
A
3
R
2
N
1
D
0
C
2
E
0
Q
0
G
0
H
1
I
1
L
2
K
0
M
0
F
0
P
1
S
0
T
1
W
0
Y
2
V
Amino Acid Distribution
A: 2 R: 3 N: 2 D: 1 C: 0 E: 2 Q: 0 G: 0 H: 0 I: 1 L: 1 K: 2 M: 0 F: 0 P: 0 S: 1 T: 0 W: 1 Y: 0 V: 2
Chemical Descriptors
18 reviewed residue count
C94H158N32O28 sequence-only estimate (linear, free termini)
2184.49 sequence-only estimate (linear, free termini)
10.56 sequence-only estimate (linear, free termini)
+2 sequence-only estimate (linear, free termini)
3.94 sequence-only estimate (linear, free termini)
-1.122 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA