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Peptide record

TPDB04768

Antibacterial standard
15 amino acids
Basic Information
3D PDB MODEL
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TPDB04768
Antibacterial
Anti-infective peptides
AntiBP3 Peptipedia
standard
No
A 15-aa standard-residue antibacterial peptide sequence curated from AntiBP3 and Peptipedia, with an available 3D structural model.
Sequence
AKKKLSAWWLAWWVK
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C97H141N23O17
RNDCEQGHIMFPTY
KW
1901.33
11.00
4
0
10
+4
-0.20
-0.187
91.33
Mammalian: 4.4 hour Yeast: >20 hour E.coli: >10 hour
22000
11.57
1
Residue Composition
number
3
A
0
R
0
N
0
D
0
C
0
E
0
Q
0
G
0
H
0
I
2
L
4
K
0
M
0
F
0
P
1
S
0
T
4
W
0
Y
1
V
Amino Acid Distribution
A: 3 R: 0 N: 0 D: 0 C: 0 E: 0 Q: 0 G: 0 H: 0 I: 0 L: 2 K: 4 M: 0 F: 0 P: 0 S: 1 T: 0 W: 4 Y: 0 V: 1
Chemical Descriptors
15 reviewed residue count
C97H141N23O17 sequence-only estimate (linear, free termini)
1901.33 sequence-only estimate (linear, free termini)
11.00 sequence-only estimate (linear, free termini)
+4 sequence-only estimate (linear, free termini)
-0.20 sequence-only estimate (linear, free termini)
-0.187 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA