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Peptide record

TPDB04753

Antibacterial standard
14 amino acids
Basic Information
3D PDB MODEL
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TPDB04753
Antibacterial
Anti-infective peptides
AntiBP3 dbAMP DRAMP Peptipedia
standard
No
A 14-aa standard-residue antibacterial peptide sequence curated from AntiBP3, dbAMP, DRAMP, and other sources, with an available 3D structural model.
Sequence
IDWKKLLDAAKKIL
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C79H135N19O19
RNCEQGHMFPSTYV
K
1655.06
10.16
4
2
8
+2
0.65
0.036
153.57
Mammalian: 20 hour Yeast: 30 min E.coli: >10 hour
5500
3.32
0
Residue Composition
number
2
A
0
R
0
N
2
D
0
C
0
E
0
Q
0
G
0
H
2
I
3
L
4
K
0
M
0
F
0
P
0
S
0
T
1
W
0
Y
0
V
Amino Acid Distribution
A: 2 R: 0 N: 0 D: 2 C: 0 E: 0 Q: 0 G: 0 H: 0 I: 2 L: 3 K: 4 M: 0 F: 0 P: 0 S: 0 T: 0 W: 1 Y: 0 V: 0
Chemical Descriptors
14 reviewed residue count
C79H135N19O19 sequence-only estimate (linear, free termini)
1655.06 sequence-only estimate (linear, free termini)
10.16 sequence-only estimate (linear, free termini)
+2 sequence-only estimate (linear, free termini)
0.65 sequence-only estimate (linear, free termini)
0.036 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP DRAMP

Other

Source Activity Label Source Definition
Antibacterial
dbAMP classified as Antibacterial under the Anti-bacterial function class.