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Peptide record

TPDB04734

Antibacterial standard
12 amino acids
Basic Information
3D PDB MODEL
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TPDB04734
Antibacterial
Anti-infective peptides
AntiBP3 Peptipedia
standard
No
A 12-aa standard-residue antibacterial peptide sequence curated from AntiBP3 and Peptipedia, with an available 3D structural model.
Sequence
EPFKISIHLGGY
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C65H97N15O17
ARNDCQMTWV
GI
1360.58
7.75
2
1
5
+0
0.08
0.042
97.50
Mammalian: 1 hour Yeast: 30 min E.coli: >10 hour
1490
1.10
2
Residue Composition
number
0
A
0
R
0
N
0
D
0
C
1
E
0
Q
2
G
1
H
2
I
1
L
1
K
0
M
1
F
1
P
1
S
0
T
0
W
1
Y
0
V
Amino Acid Distribution
A: 0 R: 0 N: 0 D: 0 C: 0 E: 1 Q: 0 G: 2 H: 1 I: 2 L: 1 K: 1 M: 0 F: 1 P: 1 S: 1 T: 0 W: 0 Y: 1 V: 0
Chemical Descriptors
12 reviewed residue count
C65H97N15O17 sequence-only estimate (linear, free termini)
1360.58 sequence-only estimate (linear, free termini)
7.75 sequence-only estimate (linear, free termini)
+0 sequence-only estimate (linear, free termini)
0.08 sequence-only estimate (linear, free termini)
0.042 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA