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Peptide record

TPDB04724

Antibacterial standard
11 amino acids
Basic Information
3D PDB MODEL
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TPDB04724
Antibacterial
Anti-infective peptides
AntiBP3 Peptipedia
standard
No
A 11-aa standard-residue antibacterial peptide sequence curated from AntiBP3 and Peptipedia, with an available 3D structural model.
Sequence
VKNLAELVHRF
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C61H100N18O15
DCQGIMPSTWY
LV
1325.58
10.09
3
1
6
+1
1.44
0.182
132.73
Mammalian: 100 hour Yeast: >20 hour E.coli: >10 hour
0
0.00
1
Residue Composition
number
1
A
1
R
1
N
0
D
0
C
1
E
0
Q
0
G
1
H
0
I
2
L
1
K
0
M
1
F
0
P
0
S
0
T
0
W
0
Y
2
V
Amino Acid Distribution
A: 1 R: 1 N: 1 D: 0 C: 0 E: 1 Q: 0 G: 0 H: 1 I: 0 L: 2 K: 1 M: 0 F: 1 P: 0 S: 0 T: 0 W: 0 Y: 0 V: 2
Chemical Descriptors
11 reviewed residue count
C61H100N18O15 sequence-only estimate (linear, free termini)
1325.58 sequence-only estimate (linear, free termini)
10.09 sequence-only estimate (linear, free termini)
+1 sequence-only estimate (linear, free termini)
1.44 sequence-only estimate (linear, free termini)
0.182 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA