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Peptide record

TPDB04721

Antibacterial standard
11 amino acids
Basic Information
3D PDB MODEL
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TPDB04721
Antibacterial
Anti-infective peptides
AntiBP3 Peptipedia
standard
No
A 11-aa standard-residue antibacterial peptide sequence curated from AntiBP3 and Peptipedia, with an available 3D structural model.
Sequence
YLLTEFQHLFK
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C71H103N15O17
ARNDCGIMPSWV
L
1438.69
7.75
2
1
6
+0
0.41
0.082
106.36
Mammalian: 2.8 hour Yeast: 10 min E.coli: 2 min
1490
1.04
3
Residue Composition
number
0
A
0
R
0
N
0
D
0
C
1
E
1
Q
0
G
1
H
0
I
3
L
1
K
0
M
2
F
0
P
0
S
1
T
0
W
1
Y
0
V
Amino Acid Distribution
A: 0 R: 0 N: 0 D: 0 C: 0 E: 1 Q: 1 G: 0 H: 1 I: 0 L: 3 K: 1 M: 0 F: 2 P: 0 S: 0 T: 1 W: 0 Y: 1 V: 0
Chemical Descriptors
11 reviewed residue count
C71H103N15O17 sequence-only estimate (linear, free termini)
1438.69 sequence-only estimate (linear, free termini)
7.75 sequence-only estimate (linear, free termini)
+0 sequence-only estimate (linear, free termini)
0.41 sequence-only estimate (linear, free termini)
0.082 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA