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Peptide record

TPDB04716

Antibacterial standard
9 amino acids
Basic Information
3D PDB MODEL
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TPDB04716
Antibacterial
Anti-infective peptides
AntiBP3 Peptipedia
standard
No
A 9-aa standard-residue antibacterial peptide sequence curated from AntiBP3 and Peptipedia, with an available 3D structural model.
Sequence
IVSSMFVSA
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C42H69N9O13S1
RNDCEQGHLKPTWY
S
940.12
6.02
0
0
6
-0
-1.10
1.889
118.89
Mammalian: 20 hour Yeast: 30 min E.coli: >10 hour
0
0.00
3
Residue Composition
number
1
A
0
R
0
N
0
D
0
C
0
E
0
Q
0
G
0
H
1
I
0
L
0
K
1
M
1
F
0
P
3
S
0
T
0
W
0
Y
2
V
Amino Acid Distribution
A: 1 R: 0 N: 0 D: 0 C: 0 E: 0 Q: 0 G: 0 H: 0 I: 1 L: 0 K: 0 M: 1 F: 1 P: 0 S: 3 T: 0 W: 0 Y: 0 V: 2
Chemical Descriptors
9 reviewed residue count
C42H69N9O13S1 sequence-only estimate (linear, free termini)
940.12 sequence-only estimate (linear, free termini)
6.02 sequence-only estimate (linear, free termini)
-0 sequence-only estimate (linear, free termini)
-1.10 sequence-only estimate (linear, free termini)
1.889 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA